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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 18435

  1. Occurrence, antimicrobial susceptibility, and resistance genes of Staphylococcus aureus in milk and milk products in the Arsi highlands of Ethiopia

    • BMC Microbiology
    • In Ethiopia, milk production and handling practices often lack proper hygiene measures, leading to the potential contamination of milk and milk products with Staphylococcus aureus (S. aureus), including methicill...

      • Bacterial pathogens
      • Staphylococcus aureus
  2. Differential mechanism between Listeria monocytogenes strains with different virulence contaminating ready-to-eat sausages during the simulated gastrointestinal tract

    • Food Research International
    • Listeria monocytogenes exhibits varying levels of pathogenicity when entering the host through contaminated food. However, little is known regarding the stress response and environmental tolerance mechanism of different virulence strains to host gastrointestinal (GI) stimuli. This study analyzed the differences in the survival and genes of stress responses among two strains of L.

      • Bacterial pathogens
      • Listeria monocytogenes
  3. Megaplasmid Dissemination in Multidrug-Resistant Salmonella Serotypes from Backyard and Commercial Broiler Production Systems in the Southeastern United States

    • Foodborne Pathogens and Disease
    • Over the past decade, there has been a rise in U.S. backyard poultry ownership, raising concern for residential area antimicrobial-resistant (AMR) Salmonella contamination. This study aims to lay the groundwork to better understand the persistence of AMR Salmonella in residential broiler production systems and make comparisons with commercial systems.

      • Bacterial pathogens
      • Salmonella
  4. Occurrence, virulence, and resistance genes in Salmonella enterica isolated from an integrated poultry company in Jordan

    • Poultry Science
    • Salmonella is considered one of the most common foodborne pathogens worldwide. The annual number of hospitalizations and deaths related to zoonotic salmonellosis, which is transmitted from animals to humans and infects poultry and meat, is expected to be significant.

      • Bacterial pathogens
      • Salmonella
  5. Meta-Analysis and Systematic Review of Phenotypic and Genotypic Antimicrobial Resistance and Virulence Factors in Vibrio parahaemolyticus Isolated from Shrimp

    • Antibiotics
    • This systematic review and meta-analysis investigates the prevalence of Vibrio parahaemolyticus, its virulence factors, antimicrobial resistance (AMR), and its resistance determinants in shrimp. This study was conducted following the Preferred Reporting Items for Systematic Reviews and Meta-Analysis (PRISMA) guidelines, to identify and select relevant peer-reviewed articles published between January 2020 and December 2022.

      • Bacterial pathogens
      • Vibrio
  6. Antibacterial Activity of Oregano (Origanum vulgare L.) Essential Oil Vapors against Microbial Contaminants of Food-Contact Surfaces

    • Antibiotics
    • The antimicrobial effect of eight essential oils’ vapors against pathogens and spoilage bacteria was assayed. Oreganum vulgare L. essential oil (OVO) showed a broad antibacterial effect, with Minimum Inhibitory Concentration (MIC) values ranging from 94 to 754 µg cm−3 air, depending on the bacterial species.

      • Bacterial pathogens
      • Staphylococcus aureus
  7. Catabolism of phenolics from grape peel and its effects on gut microbiota during in vitro colonic fermentation

    • Journal of the Science of Food and Agriculture
    • Abstract Background Grape peels, the main by‐products of wine processing, are rich in bioactive ingredients of phenolics, including proanthocyanidins, flavonoids and anthocyanins. Phenolics have the function of regulating intestinal microbiota and promoting intestinal health. From the perspective of the dietary nutrition of grape peel phenolics (GPP), this study was to investigate the influence of GPP on the composition and metabolism of human gut microbiota during in vitro fermentation.

      • Bacterial pathogens
      • Staphylococcus aureus
  8. Comparison of the fecal microbiota of adult healthy dogs fed a plant-based (vegan) or an animal-based diet

    • Frontiers in Microbiology
    • PurposePet guardians are increasingly seeking vegan dog foods. However, research on the impact of these diets on gastrointestinal (GI) physiology and health is limited. In humans, vegan diets modify the GI microbiota, increasing beneficial digestive microorganisms. This study aimed to examine the canine fecal microbiota in response to a vegan diet compared to an animal-based diet.MethodsSixty-one client-owned healthy adult dogs completed a randomized, double-blinded longitudinal study.

      • Bacterial pathogens
      • Campylobacter
  9. Identification of novel small molecule inhibitors of twin arginine translocation (Tat) pathway and their effect on the control of Campylobacter jejuni in chickens

    • Frontiers in Microbiology
    • IntroductionControl of Campylobacter from farm to fork is challenging due to the frequent emergence of antimicrobial-resistant isolates. Furthermore, poultry production systems are known reservoirs of Campylobacter. The twin-arginine translocation (Tat) pathway is a crucial bacterial secretion system that allows Campylobacter to colonize the host intestinal tract by using formate as the main source of energy.

      • Bacterial pathogens
      • Campylobacter
      • Chemical contaminants
      • Antibiotic residues
  10. Population characteristics of pathogenic Escherichia coli in puerperal metritis of dairy cows in Ningxia region of China: a systemic taxa distribution of virulence factors and drug resistance genes

    • Frontiers in Microbiology
    • Escherichia coli (E. coli) is closely associated with the occurrence of puerperal metritis in dairy cows. E. coli carries some the virulence and multi-drug resistant genes, which pose a serious threat to the health of postpartum cows. In this study, E. coli was isolated and identified from the uterine contents of postpartum cows with puerperal metritis in the Ningxia region of China, and its phylogenetic subgroups were determined. Meanwhile, virulence and drug resistance genes carried by E.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  11. An opportunity for post‐harvest seafood safety: atmospheric pressure air or helium cold plasma to control Salmonella Enteritidis in sea bass

    • International Journal of Food Science & Technology
    • The graphical abstract represents the main steps of the study. Air plasma and helium plasma provided a maximum reduction of 2.79 Log CFU in medium and 0.9 and 1.1 Log CFU/g in fish, respectively. Summary Salmonella contamination of fish after harvest is a significant food safety risk. To control this risk, it was aimed to reduce Salmonella Enteritidis in sea bass by helium and air plasma.

      • Bacterial pathogens
      • Salmonella
      • Produce Safety
      • Post Harvest
  12. Modeling the Growth Probability of Clostridium Perfringens in Cooked Cured Meat as Affected by Sodium Chloride and Sodium Tripolyphosphate

    • Microbial Risk Analysis
    • Clostridium perfringens has been implicated in food poisoning outbreaks linked to cooked cured meat. Although there are regulatory requirements to prevent its growth during meat production, additional control measures may reduce the C. perfringens risk. This study examined the effect of sodium chloride (salt) and sodium tripolyphosphate (STPP) on the growth probability of C. perfringens in a cooked cured meat.

      • Bacterial pathogens
      • Clostridium perfringens
  13. Recombinase polymerase amplification combined with Pyrococcus furiosus Argonaute for fast Salmonella spp. testing in food safety

    • International Journal of Food Microbiology
    • Foodborne illness caused by Salmonella spp. is one of the most prevalent public health problems globally, which have brought immeasurable economic burden and social impact to countries around the world. Neither current nucleic acid amplification detection method nor standard culture method (2–3 days) are suitable for field detection in areas with a heavy burden of Salmonella spp.

      • Bacterial pathogens
      • Salmonella
  14. Surveillance of stewed meat products in Shanghai, China: Importance of controlling processing environment contamination for Listeria monocytogenes

    • LWT
    • Human listeriosis is a foodborne disease caused by Listeria monocytogenes contamination. Most cases occur due to consumption of ready-to-eat (RTE) foods. Stewed meat in seasoning, a type of pre-packaged ready-to-eat (RTE) food, is a popular traditional product in China. We used whole genome sequencing to analyze core genome multilocus sequence typing (cgMLST), serogroups and multilocus typing sequence typing (ST) of 67 L.

      • Bacterial pathogens
      • Listeria monocytogenes
  15. Isolation and characterization of novel Staphylococcus aureus bacteriophage Hesat from dairy origin

    • Applied Microbiology and Biotechnology
    • A novel temperate phage, named Hesat, was isolated by the incubation of a dairy strain of Staphylococcus aureus belonging to spa-type t127 with either bovine or ovine milk.

      • Bacterial pathogens
      • Staphylococcus aureus
  16. Suitability of Escherichia coli ATCC 11229 as Salmonella enterica surrogate for strawberry nectar pasteurization

    • LWT
    • Heat resistance, D- and z-values of five Salmonella enterica strains, namely S. Senftenberg LTH 5703, S. Typhimurium ATCC 13311 and ATCC 14028, S. Saintpaul LTH 6494, and S. Enteritidis ATCC 13076, as well as of a Salmonella cocktail and three potential surrogate strains were investigated in phosphate buffered saline and strawberry nectar (12° Brix).

      • Bacterial pathogens
      • Salmonella
  17. Establishment of a real‐time fluorescence and visual colorimetric detection method for Staphylococcus aureus based on loop‐mediated isothermal amplification

    • Journal of Food Safety
    • A novel loop‐mediated isothermal amplification assay was established on the basis of screening and verification of detection targets for rapid detection of Staphylococcus aureus. After amplification, there are two distinct methodologies for result determination: one involves the analysis of fluorescence curves, while the other involves the observation of color changes.

      • Bacterial pathogens
      • Staphylococcus aureus
  18. Effect of food environment on the ability of microorganisms to form biofilms

    • Journal of Food Safety
    • This research study the effect of the food product, even present in trace in the bacteria's habitat, on the bacteria potential of biofilm formation. Understanding the conditions that favor or disadvantage the formation of biofilms could help in the development and implementation of new alternative strategies to combat food‐borne infections.

      • Bacterial pathogens
      • Staphylococcus aureus
  19. Differences in shrimp pond bottom soil properties and bacterial load between acute hepatopancreatic necrosis disease (AHPND)‐infected ponds and AHPND‐free ponds and their relation to AHPND

    • Journal of the World Aquaculture Society
    • Abstract This study investigated the disparities in soil characteristics and pathogenic bacteria prevalence between shrimp ponds affected by acute hepatopancreatic necrosis disease (AHPND) and unaffected ponds, alongside examining the spatial distribution of soil attributes in flat‐oriented pond soil strata.

      • Bacterial pathogens
      • Vibrio
  20. Modelling the Dynamics of Microbial Population and Salmonella spp. in Milk Kefir

    • Food and Bioproducts Processing
    • Kefir is a fermented dairy product based on the fermentation of milk by bacteria and yeasts. It is produced by adding kefir grains, consisting of a consortium of microorganisms, to milk in order to start a natural fermentation (Garofalo et al., 2020).

      • Bacterial pathogens
      • Salmonella
  21. Virulence Genes, Antimicrobial Resistance, and Genotypes of Campylobacter jejuni Isolated from Chicken Slaughterhouses in South Korea

    • Foodborne Pathogens and Disease
    • Campylobacter jejuni represents one of the leading causes of bacterial gastroenteritis in humans and is primarily linked to chicken meat contamination. In the present study, we analyzed the virulence and survival genes, antimicrobial resistance, and the clonal distribution of 50 C. jejuni isolates obtained from various sources in 14 chicken slaughterhouses across 8 provinces in South Korea from 2019 to 2022.

      • Bacterial pathogens
      • Campylobacter
  22. A Smartphone-Enabled Colorimetric Platform Based on Enzyme Cascade Amplification Strategy for Detection of Staphylococcus aureus in Milk

    • Journal of Dairy Science
      • Bacterial pathogens
      • Staphylococcus aureus
  23. Deciphering Microbiome, Transcriptome, and Metabolic Interactions in the Presence of Probiotic Lactobacillus acidophilus against Salmonella Typhimurium in a Murine Model

    • Antibiotics
    • Salmonella enterica serovar Typhimurium (S. Typhimurium), a foodborne pathogen that poses significant public health risks to humans and animals, presents a formidable challenge due to its antibiotic resistance. This study explores the potential of Lactobacillus acidophilus (L. acidophilus 1.3251) probiotics as an alternative strategy to combat antibiotic resistance associated with S. Typhimurium infection.

      • Bacterial pathogens
      • Salmonella
  24. Protective effect of chicken yolk antibody Y against Campylobacter jejuni induced diarrhea in cats

    • Frontiers in Microbiology
    • Campylobacter jejuni (C. jejuni) is a common pathogen that often causes diarrhea, loss of appetite, and even enteritis in domestic cats, affecting their growth and development, especially in kittens under 6 months of age. Oral passive immunization with chicken yolk antibody Y has been proved effective for the treatment of gastrointestinal pathogen infections due to its high specificity. In this study, C.

      • Bacterial pathogens
      • Campylobacter
  25. Comprehensive whole genome analysis of Staphylococcus aureus isolates from dairy cows with subclinical mastitis

    • Frontiers in Microbiology
    • Staphylococcus species are the primary cause of mastitis in dairy cows across the world. Staphylococcus aureus has recently become a pathogen that is zoonotic and multidrug resistant. This study aimed to sequence whole genomes of 38 S. aureus isolates from 55 subclinical mastitis dairy cows of 7 small-scale farmers in the Free State Province, South Africa and document and their antimicrobial and virulence genes.

      • Bacterial pathogens
      • Staphylococcus aureus